-- Published in 2019--
Pan, H., Cole, T. L., Bi, X., Fang, M., Zhou, C., Yang, Z., Ksepka, D. T., Hart, T., Bouzat, J. L., Argilla, L. S., Bertelsen, M. F., Boersma, P. D., Bost, C. A., Cherel, Y., Dann, P., Fiddaman, S. R., Howard, P., Labuschagne, K., Mattern, T., Miller, G., Parker, P., Phillips, R. A., Quillfeldt, P., Ryan, P. G., Taylor, H., Thompson, D. R., Young, M. J., Ellegaard, M. R., Gilbert, M. T. P., Sinding, M. S., Pacheco, G., Shepherd, L. D., Tennyson, A. J. D., Grosser, S., Kay, E., Nupen, L. J., Ellenberg, U., Houston, D. M., Reeve, A. H., Johnson, K., Masello, J. F., Stracke, T., McKinlay, B., Borboroglu, P. G., Zhang, D. X. & Zhang, G. High-coverage genomes to elucidate the evolution of penguins. Gigascience 8, doi:10.1093/gigascience/giz117 (2019)
M. Farré, Q. Li, I. Darolti, Y. Zhou, J. Damas, A. A. Proskuryakova, A. I. Kulemzina, L. G. Chemnick, J. Kim, O. A. Ryder, J. Ma, A. S. Graphodatsky, G. Zhang, D. M. Larkin, H. A. Lewin, An integrated chromosome-scale genome assembly of the Masai giraffe (Giraffa camelopardalis tippelskirchi). GigaScience 8, (2019)10.1093/gigascience/giz090)
Y. He, H. Pan, G. Zhang, S. He, Comparative study on pattern recognition receptors in non-teleost ray-finned fishes and their evolutionary significance in primitive vertebrates. Science China Life Sciences 62, 566-578 (2019); published online EpubApril 01 (10.1007/s11427-019-9481-8)
K. M. Kapheim, H. Pan, C. Li, C. Blatti, 3rd, B. A. Harpur, P. Ioannidis, B. M. Jones, C. F. Kent, L. Ruzzante, L. Sloofman, E. Stolle, R. M. Waterhouse, A. Zayed, G. Zhang, W. T. Wcislo, Draft Genome Assembly and Population Genetics of an Agricultural Pollinator, the Solitary Alkali Bee (Halictidae: Nomia melanderi). G3 9, 625-634 (2019); published online EpubMar 7 (10.1534/g3.118.200865)
J. Stiller, G. Zhang, Comparative Phylogenomics, a Stepping Stone for Bird Biodiversity Studies. Diversity 11, 115 (2019).
L. Chen, Q. Qiu, Y. Jiang, K. Wang, Z. Lin, Z. Li, F. Bibi, Y. Yang, J. Wang, W. Nie, W. Su, G. Liu, Q. Li, W. Fu, X. Pan, C. Liu, J. Yang, C. Zhang, Y. Yin, Y. Wang, Y. Zhao, C. Zhang, Z. Wang, Y. Qin, W. Liu, B. Wang, Y. Ren, R. Zhang, Y. Zeng, R. R. da Fonseca, B. Wei, R. Li, W. Wan, R. Zhao, W. Zhu, Y. Wang, S. Duan, Y. Gao, Y. E. Zhang, C. Chen, C. Hvilsom, C. W. Epps, L. G. Chemnick, Y. Dong, S. Mirarab, H. R. Siegismund, O. A. Ryder, M. T. P. Gilbert, H. A. Lewin, G. Zhang, R. Heller, W. Wang, Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits. Science 364, eaav6202 (2019)10.1126/science.aav6202).
Y. Wang, C. Zhang, N. Wang, Z. Li, R. Heller, R. Liu, Y. Zhao, J. Han, X. Pan, Z. Zheng, X. Dai, C. Chen, M. Dou, S. Peng, X. Chen, J. Liu, M. Li, K. Wang, C. Liu, Z. Lin, L. Chen, F. Hao, W. Zhu, C. Song, C. Zhao, C. Zheng, J. Wang, S. Hu, C. Li, H. Yang, L. Jiang, G. Li, M. Liu, T. S. Sonstegard, G. Zhang, Y. Jiang, W. Wang, Q. Qiu, Genetic basis of ruminant headgear and rapid antler regeneration. Science 364, eaav6335 (2019)10.1126/science.aav6335).
S. Feng, Q. Fang, R. Barnett, C. Li, S. Han, M. Kuhlwilm, L. Zhou, H. Pan, Y. Deng, G. Chen, A. Gamauf, F. Woog, R. Prys-Jones, T. Marques-Bonet, M. T. P. Gilbert, G. Zhang. The Genomic Footprints of the Fall and Recovery of the Crested Ibis.Current biology : CB, ; published online EpubJan 6 (10.1016/j.cub.2018.12.008) (2019).
-- Published in 2018 --
R Rane, D Clarke, S Pearce, G Zhang, A Hoffmann, J Oakeshott. Detoxification Genes Differ Between Cactus-, Fruit- and Flower-Feeding Drosophila. J Hered(2018).
R Rogers, L Zhou, C Chu, R Marquez, A Corl, T Linderoth, L Freeborn, M MacManes, Z Xiong, J Zheng, C Guo, X Xun, M Kronforst, K Summers, Y Wu, H Yang, C Richards-Zawacki,G Zhang, R Nielsen. Genomic Takeover by Transposable Elements in the Strawberry Poison Frog. Mol Biol Evol, 35(12): 2913-2927(2018).
G Zhang. The bird’s-eye view on chromosome evolution. Genome Biology,19:201 (2018)
C Liu, Y Zhang, Y Ren, H Wang, S Li, F Jiang, L Yin, X Qiao, G Zhang, W Qian, B Liu, W Fan. The genome of the golden apple snail Pomacea canaliculata provides insight into stress tolerance and invasive adaptation. Gigascience, 7(9) (2018)
B Qiu, R Larsen, N Chang, J Wang, J Boomsma, G Zhang. Towards reconstructing the ancestral brain gene-network regulating caste differentiation in ants. Nature ecology & evolution, 2(11):1782-91 (2018)
G Zhang. The first AsiaEvo conference, connecting Asian evolutionary biologists to the world. National Science Review, 66:1 (2018)
A Kukekova, J Johnson, X Xiang, S Feng, S Liu, H Rando, A Kharlamova, Y Herbeck, N Serdyukova, Z Xiong, V Beklemischeva, K Koepfli, R Gulevich, A Vladimirova, J Hekman, P Perelman, A Graphodatsky, S O'Brien, X Wang, A Clark, G Acland, L Trut, G Zhang. Red fox genome assembly identifies genomic regions associated with tame and aggressive behaviours. Nature ecology & evolution, 46:622 (2018)
H Lewin, G Robinson, W Kress, W Baker, J Coddington, K Crandall, R Durbin, S Edwards, F Forest, M Gilbert, M Goldstein, I Grigoriev, K Hackett, D Haussler, E Jarvis, W Johnson, A Patrinos, S Richards, J Castilla-Rubio, M van Sluys, P Soltis, X Xu, H Yang, G Zhang. Earth BioGenome Project: Sequencing life for the future of life Proceedings of the National Academy of Sciences, 115(17):4325-4333 (2018)
M Zepeda Mendoza, Z Xiong, M Escalera-Zamudio, A Runge, J Thézé, D Streicker, H Frank, E Loza-Rubio, S Liu, O Ryder, J Samaniego Castruita, A Katzourakis, G Pacheco, B Taboada, U Löber, O Pybus, Y Li, E Rojas-Anaya, K Bohmann, A Carmona Baez, C Arias, S Liu, A Greenwood, M Bertelsen, N White, M Bunce, G Zhang, T Sicheritz-Ponten, M Gilbert. Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat. Nature ecology & evolution, 2(4):659-668 (2018)
C Zhou, S Liu, W Song, S Luo, G Meng, C Yang, H Yang, J Ma, L Wang, S Gao, J Wang, H Yang, Y Zhao, H Wang, X Zhou. Characterization of viral RNA splicing using whole-transcriptome datasets from host species. Scientific reports, 8(1):3273 (2018)
-- Published in 2017 --
C Zhang, L Chen, Y Zhou, K Wang, L Chemnick, O Ryder, W Wang, G Zhang, Q Qiu. Draft genome of the milu (Elaphurus davidianus) GigaScience, 7(2):203 (2017)
A Avalos, H Pan, C Li, J Acevedo-Gonzalez, G Rendon, C Fields, P Brown, T Giray, G Robinson, M Hudson, G Zhang. A soft selective sweep during rapid evolution of gentle behaviour in an Africanized honeybee Nature Communications, 8(1):351 (2017)
A Hargreaves, L Zhou, J Christensen, F Marlétaz, S Liu, F Li, P Jansen, E Spiga, M Hansen, S Pedersen, S Biswas, K Serikawa, B Fox, W Taylor, J Mulley, G Zhang, R Heller, P Holland. Genome sequence of a diabetes-prone rodent reveals a mutation hotspot around the ParaHox gene cluster. Proceedings of the National Academy of Sciences of the United States of America, 114(29):7677-7682 (2017)
S Mak, S Gopalakrishnan, C Carøe, C Geng, S Liu, M Sinding, L Kuderna, W Zhang, S Fu, F Vieira, M Germonpré, H Bocherens, S Fedorov, B Petersen, T Sicheritz-Ponten, T Marques-Bonet, G Zhang, H Jiang, M Gilbert. Comparative performance of the BGISEQ-500 versus Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing. GigaScience, (2017)
J Gao, Q Li, Z Wang, Y Zhou, P Martelli, F Li, Z Xiong, J Wang, H Yang, G Zhang. Sequencing, de novo assembling and annotating the genome of the endangered Chinese crocodile lizard Shinisaurus crocodilurus. GigaScience, 6(7):1-6 (2017)
J Boomsma, S Brady, R Dunn, J Gadau, J Heinze, L Keller, C Moreau, N Sanders, L Schrader, T Schultz, L Sundstrom, P Ward, W Wcislo, G Zhang, The GAGA Consortium. Forum The Global Ant Genomics Alliance (GAGA) Myrmecological News, 25(2):61-66 (2017)
H Xiong, D Liu, Q Li, M Lei, L Xu, L Wu, Z Wang, S Ren, W Li, M Xia, L Lu, H Lu, Y Hou, S Zhu, X Liu, Y Sun, J Wang, H Yang, K Wu, X Xu, L Lee. RED-ML: a novel, effective RNA editing detection method based on machine learning. GigaScience, 6(5):1-8 (2017)
R Peters, L Krogmann, C Mayer, A Donath, S Gunkel, K Meusemann, A Kozlov, L Podsiadlowski, M Petersen, R Lanfear, P Diez, J Heraty, K Kjer, S Klopfstein, R Meier, C Polidori, T Schmitt, S Liu, X Zhou, T Wappler, J Rust, B Misof, O Niehuis. Evolutionary History of the Hymenoptera. Current biology : CB, 27(7):1013-1018 (2017)
R Seki, C Li, Q Fang, S Hayashi, S Egawa, J Hu, L Xu, H Pan, M Kondo, T Sato, H Matsubara, N Kamiyama, K Kitajima, D Saito, Y Liu, M Gilbert, Q Zhou, X Xu, T Shiroishi, N Irie, K Tamura, G Zhang. Functional roles of Aves class-specific cis-regulatory elements on macroevolution of bird-specific features. Nature Communications, 8:14229 (2017)
C Shao, B Bao, Z Xie, X Chen, B Li, X Jia, Q Yao, G Ortí, W Li, X Li, K Hamre, J Xu, L Wang, F Chen, Y Tian, A Schreiber, N Wang, F Wei, J Zhang, Z Dong, L Gao, J Gai, T Sakamoto, S Mo, W Chen, Q Shi, H Li, Y Xiu, Y Li, W Xu, Z Shi, G Zhang, D Power, Q Wang, M Schartl, S Chen. The genome and transcriptome of Japanese flounder provide insights into flatfish asymmetry. Nature genetics, 49(1):119-124 (2017)
-- Published in 2016 --
Z Xiong, F Li, Q Li, L Zhou, T Gamble, J Zheng, L Kui, C Li, S Li, H Yang, G Zhang. Draft genome of the leopard gecko, Eublepharis macularius. GigaScience, 5(1):47 (2016)
W Yin, Z Wang, Q Li, J Lian, Y Zhou, B Lu, L Jin, P Qiu, P Zhang, W Zhu, B Wen, Y Huang, Z Lin, B Qiu, X Su, H Yang, G Zhang, G Yan, Q Zhou. Evolutionary trajectories of snake genes and genomes revealed by comparative analyses of five-pacer viper. Nature Communications, 7:13107 (2016)
H Pan, H Yu, V Ravi, C Li, A Lee, M Lian, B Tay, S Brenner, J Wang, H Yang, G Zhang, B Venkatesh. The genome of the largest bony fish, ocean sunfish (Mola mola), provides insights into its fast growth rate. GigaScience, 5(1):36 (2016)
Z Wang, J Lian, Q Li, P Zhang, Y Zhou, X Zhan, G Zhang. RES-Scanner: a software package for genome-wide identification of RNA-editing sites. GigaScience, 5(1):37 (2016)
S Nygaard, H Hu, C Li, M Schiøtt, Z Chen, Z Yang, Q Xie, C Ma, Y Deng, R Dikow, C Rabeling, D Nash, W Wcislo, S Brady, T Schultz, G Zhang, J Boomsma. Reciprocal genomic evolution in the ant-fungus agricultural symbiosis. Nature Communications, 7:12233 (2016)
J Machado, W Johnson, M Gilbert, G Zhang, E Jarvis, S O'Brien, A Antunes. Bone-associated gene evolution and the origin of flight in birds. BMC genomics, 17(1):371 (2016)
D Almeida, E Maldonado, I Khan, L Silva, M Gilbert, G Zhang, E Jarvis, S O'Brien, W Johnson, A Antunes. Whole-Genome Identification, Phylogeny, and Evolution of the Cytochrome P450 Family 2 (CYP2) Subfamilies in Birds. Genome Biology and Evolution, 8(4):1115-1131 (2016)
-- Published in 2015 --
P Dobrynin, S Liu, G Tamazian, Z Xiong, A Yurchenko, K Krasheninnikova, S Kliver, A Schmidt-Küntzel, K Koepfli, W Johnson, L Kuderna, R García-Pérez, M Manuel, R Godinez, A Komissarov, A Makunin, V Brukhin, W Qiu, L Zhou, F Li, J Yi, C Driscoll, A Antunes, T Oleksyk, E Eizirik, P Perelman, M Roelke, D Wildt, M Diekhans, T Marques-Bonet, L Marker, J Bhak, J Wang, G Zhang, S O'Brien. Genomic legacy of the African cheetah, Acinonyx jubatus. Genome biology, 16(1):277 (2015)
I Khan, Z Yang, E Maldonado, C Li, G Zhang, M Gilbert, E Jarvis, S O'Brien, W Johnson, A Antunes. Olfactory Receptor Subgenomes Linked with Broad Ecological Adaptations in Sauropsida. Molecular Biology and Evolution, 32(11):2832-2843 (2015)
R Borges, I Khan, W Johnson, M Gilbert, G Zhang, E Jarvis, S O'Brien, A Antunes. Gene loss, adaptive evolution and the co-evolution of plumage coloration genes with opsins in birds. BMC genomics, 16(1):751 (2015)
J Cracraft, P Houde, S Ho, D Mindell, J Fjeldså, B Lindow, S Edwards, C Rahbek, S Mirarab, T Warnow, M Gilbert, G Zhang, E Braun, E Jarvis. Response to Comment on "Whole-genome analyses resolve early branches in the tree of life of modern birds". Science (New York, N.Y.), 349(6255):1460 (2015)
X Li, D Fan, W Zhang, G Liu, L Zhang, L Zhao, X Fang, L Chen, Y Dong, Y Chen, Y Ding, R Zhao, M Feng, Y Zhu, Y Feng, X Jiang, D Zhu, H Xiang, X Feng, S Li, J Wang, G Zhang, M Kronforst, W Wang. Outbred genome sequencing and CRISPR/Cas9 gene editing in butterflies. Nature Communications, 6:8212 (2015)
K Kapheim, H Pan, C Li, S Salzberg, D Puiu, T Magoc, H Robertson, M Hudson, A Venkat, B Fischman, A Hernandez, M Yandell, D Ence, C Holt, G Yocum, W Kemp, J Bosch, R Waterhouse, E Zdobnov, E Stolle, F Kraus, S Helbing, R Moritz, K Glastad, B Hunt, M Goodisman, F Hauser, C Grimmelikhuijzen, D Pinheiro, F Nunes, M Soares, ? Tanaka, Z Simões, K Hartfelder, J Evans, S Barribeau, R Johnson, J Massey, B Southey, M Hasselmann, D Hamacher, M Biewer, C Kent, A Zayed, C Blatti, S Sinha, J Johnston, S Hanrahan, S Kocher, J Wang, G Robinson, G Zhang. Social evolution. Genomic signatures of evolutionary transitions from solitary to group living. Science (New York, N.Y.), 348(6239):1139-1143 (2015)
Y Dong, X Zhang, M Xie, B Arefnezhad, Z Wang, W Wang, S Feng, G Huang, R Guan, W Shen, R Bunch, R McCulloch, Q Li, B Li, G Zhang, X Xu, J Kijas, G Salekdeh, W Wang, Y Jiang. Reference genome of wild goat (capra aegagrus) and sequencing of goat breeds provide insight into genic basis of goat domestication. BMC genomics, 16(1):431 (2015)
G Zhang, C Rahbek, G Graves, F Lei, E Jarvis, M Gilbert. Genomics: Bird sequencing project takes off. Nature, 522(7554):34 (2015)
L Yan, X Wang, H Liu, Y Tian, J Lian, R Yang, S Hao, X Wang, S Yang, Q Li, S Qi, L Kui, M Okpekum, X Ma, J Zhang, Z Ding, G Zhang, W Wang, Y Dong, J Sheng. The Genome of Dendrobium officinale Illuminates the Biology of the Important Traditional Chinese Orchid Herb. Molecular Plant, 8(6):922-934 (2015)
K Nadachowska-Brzyska, C Li, L Smeds, G Zhang, H Ellegren. Temporal Dynamics of Avian Populations during Pleistocene Revealed by Whole-Genome Sequences. Current biology : CB, 25(10):1375-1380 (2015)
Y Sun, Z Xiong, X Xiang, S Liu, W Zhou, X Tu, L Zhong, L Wang, D Wu, B Zhang, C Zhu, M Yang, H Chen, F Li, L Zhou, S Feng, C Huang, G Zhang, D Irwin, D Hillis, R Murphy, H Yang, J Che, J Wang, Y Zhang. Whole-genome sequence of the Tibetan frog Nanorana parkeri and the comparative evolution of tetrapod genomes. Proceedings of the National Academy of Sciences of the United States of America, 112(11):E1257-62 (2015)
S Kocher, C Li, W Yang, H Tan, S Yi, X Yang, H Hoekstra, G Zhang, N Pierce, D Yu. Erratum to: The draft genome of a socially polymorphic halictid bee, Lasioglossum albipes Genome biology, 16(1):34 (2015)
L Eöry, M Gilbert, C Li, B Li, A Archibald, B Aken, G Zhang, E Jarvis, P Flicek, D Burt. Avianbase: a community resource for bird genomics. Genome biology, 16(1):21 (2015)
M Parks, S Subramanian, C Baroni, M Salvatore, G Zhang, C Millar, D Lambert. Ancient population genomics and the study of evolution. Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 370(1660):20130381 (2015)
J Korb, M Poulsen, H Hu, C Li, J Boomsma, G Zhang, J Liebig. A genomic comparison of two termites with different social complexity. Frontiers in Genetics, 6:9 (2015)
J Zhang, C Li, Q Zhou, G Zhang. Improving the ostrich genome assembly using optical mapping data. GigaScience, 4(1):24 (2015)
E Jarvis, S Mirarab, A Aberer, B Li, P Houde, C Li, S Ho, B Faircloth, B Nabholz, J Howard, A Suh, C Weber, R da Fonseca, A Alfaro-Núñez, N Narula, L Liu, D Burt, H Ellegren, S Edwards, A Stamatakis, D Mindell, J Cracraft, E Braun, T Warnow, W Jun, M Gilbert, G Zhang, Avian Phylogenomics Consortium. Phylogenomic analyses data of the avian phylogenomics project. GigaScience, 4(1):4-9 (2015)
A Georges, Q Li, J Lian, D O’Meally, J Deakin, Z Wang, P Zhang, M Fujita, H Patel, C Holleley, Y Zhou, X Zhang, K Matsubara, P Waters, J Graves, S Sarre, G Zhang. High-coverage sequencing and annotated assembly of the genome of the Australian dragon lizard Pogona vitticeps. GigaScience, 4(1):45 (2015)
-- Published in 2014 --
J Pereira, W Johnson, S O'Brien, E Jarvis, G Zhang, M Gilbert, V Vasconcelos, A Antunes. Evolutionary Genomics and Adaptive Evolution of the Hedgehog Gene Family (Shh, Ihh and Dhh) in Vertebrates PloS one, 9(12):e74132 (2014)
Z Wang, J Zhang, W Yang, N An, P Zhang, G Zhang, Q Zhou. Temporal genomic evolution of bird sex chromosomes. BMC evolutionary biology, 14(1):250 (2014)
R Meredith, G Zhang, M Gilbert, E Jarvis, M Springer. Evidence for a single loss of mineralized teeth in the common avian ancestor. Science (New York, N.Y.), 346(6215):1254390 (2014)
G Zhang, E Jarvis, M Gilbert. A flock of genomes Science (New York, N.Y.), 346(6215):1308-1309 (2014)
A Pfenning, E Hara, O Whitney, M Rivas, R Wang, P Roulhac, J Howard, M Wirthlin, P Lovell, G Ganapathy, J Mouncastle, M Moseley, J Thompson, E Soderblom, A Iriki, M Kato, M Gilbert, G Zhang, T Bakken, A Bongaarts, A Bernard, E Lein, C Mello, A Hartemink, E Jarvis. Convergent transcriptional specializations in the brains of humans and song-learning birds. Science (New York, N.Y.), 346(6215):1256846 (2014)
M Greenwold, W Bao, E Jarvis, H Hu, C Li, M Gilbert, G Zhang, R Sawyer. Dynamic evolution of the alpha (α) and beta (β) keratins has accompanied integument diversification and the adaptation of birds into novel lifestyles. BMC evolutionary biology, 14(1):249 (2014)
Q Zhou, J Zhang, D Bachtrog, N An, Q Huang, E Jarvis, M Gilbert, G Zhang. Complex evolutionary trajectories of sex chromosomes across bird taxa. Science (New York, N.Y.), 346(6215):1246338 (2014)
E Jarvis, S Mirarab, A Aberer, B Li, P Houde, C Li, S Ho, B Faircloth, B Nabholz, J Howard, A Suh, C Weber, R da Fonseca, J Li, F Zhang, H Li, L Zhou, N Narula, L Liu, G Ganapathy, B Boussau, M Bayzid, V Zavidovych, S Subramanian, T Gabaldón, S Capella-Gutiérrez, J Huerta-Cepas, B Rekepalli, K Munch, M Schierup, B Lindow, W Warren, D Ray, R Green, M Bruford, X Zhan, A Dixon, S Li, N Li, Y Huang, E Derryberry, M Bertelsen, F Sheldon, R Brumfield, C Mello, P Lovell, M Wirthlin, M Schneider, F Prosdocimi, J Samaniego, A Vargas Velazquez, A Alfaro-Núñez, P Campos, B Petersen, T Sicheritz-Ponten, A Pas, T Bailey, P Scofield, M Bunce, D Lambert, Q Zhou, P Perelman, A Driskell, B Shapiro, Z Xiong, Y Zeng, S Liu, Z Li, B Liu, K Wu, J Xiao, X Yinqi, Q Zheng, Y Zhang, H Yang, J Wang, L Smeds, F Rheindt, M Braun, J Fjeldså, L Orlando, F Barker, K Jønsson, W Johnson, K Koepfli, S O'Brien, D Haussler, O Ryder, C Rahbek, E Willerslev, G Graves, T Glenn, J McCormack, D Burt, H Ellegren, P Alström, S Edwards, A Stamatakis, D Mindell, J Cracraft, E Braun, T Warnow, W Jun, M Gilbert, G Zhang. Whole-genome analyses resolve early branches in the tree of life of modern birds. Science (New York, N.Y.), 346(6215):1320-1331 (2014)
G Zhang, C Li, Q Li, B Li, D Larkin, C Lee, J Storz, A Antunes, M Greenwold, R Meredith, A Ödeen, J Cui, Q Zhou, L Xu, H Pan, Z Wang, L Jin, P Zhang, H Hu, W Yang, J Hu, J Xiao, Z Yang, Y Liu, Q Xie, H Yu, J Lian, P Wen, F Zhang, H Li, Y Zeng, Z Xiong, S Liu, L Zhou, Z Huang, N An, J Wang, Q Zheng, Y Xiong, G Wang, B Wang, J Wang, Y Fan, R da Fonseca, A Alfaro-Núñez, M Schubert, L Orlando, T Mourier, J Howard, G Ganapathy, A Pfenning, O Whitney, M Rivas, E Hara, J Smith, M Farré, J Narayan, G Slavov, M Romanov, R Borges, J Machado, I Khan, M Springer, J Gatesy, F Hoffmann, J Opazo, O Håstad, R Sawyer, H Kim, K Kim, H Kim, S Cho, N Li, Y Huang, M Bruford, X Zhan, A Dixon, M Bertelsen, E Derryberry, W Warren, R Wilson, S Li, D Ray, R Green, S O'Brien, D Griffin, W Johnson, D Haussler, O Ryder, E Willerslev, G Graves, P Alström, J Fjeldså, D Mindell, S Edwards, E Braun, C Rahbek, D Burt, P Houde, Y Zhang, H Yang, J Wang, Avian Genome Consortium, E Jarvis, M Gilbert, J Wang. Comparative genomics reveals insights into avian genome evolution and adaptation. Science (New York, N.Y.), 346(6215):1311-1320 (2014)
R Green, E Braun, J Armstrong, D Earl, N Nguyen, G Hickey, M Vandewege, J St John, S Capella-Gutiérrez, T Castoe, C Kern, M Fujita, J Opazo, J Jurka, K Kojima, J Caballero, R Hubley, A Smit, R Platt, C Lavoie, M Ramakodi, J Finger, A Suh, S Isberg, L Miles, A Chong, W Jaratlerdsiri, J Gongora, C Moran, A Iriarte, J McCormack, S Burgess, S Edwards, E Lyons, C Williams, M Breen, J Howard, C Gresham, D Peterson, J Schmitz, D Pollock, D Haussler, E Triplett, G Zhang, N Irie, E Jarvis, C Brochu, C Schmidt, F McCarthy, B Faircloth, F Hoffmann, T Glenn, T Gabaldón, B Paten, D Ray. Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs. Science (New York, N.Y.), 346(6215):1254449 (2014)
M Poulsen, H Hu, C Li, Z Chen, L Xu, S Otani, S Nygaard, T Nobre, S Klaubauf, P Schindler, F Hauser, H Pan, Z Yang, A Sonnenberg, Z de Beer, Y Zhang, M Wingfield, C Grimmelikhuijzen, R de Vries, J Korb, D Aanen, J Wang, J Boomsma, G Zhang. Complementary symbiont contributions to plant decomposition in a fungus-farming termite. Proceedings of the National Academy of Sciences of the United States of America, 111(40):14500-14505 (2014)
Q Li, Z Wang, J Lian, M Schiøtt, L Jin, P Zhang, Y Zhang, S Nygaard, Z Peng, Y Zhou, Y Deng, W Zhang, J Boomsma, G Zhang. Caste-specific RNA editomes in the leaf-cutting ant Acromyrmex echinatior. Nature Communications, 5:4943 (2014)
X Fang, I Seim, Z Huang, M Gerashchenko, Z Xiong, A Turanov, Y Zhu, A Lobanov, D Fan, S Yim, X Yao, S Ma, L Yang, S Lee, E Kim, R Bronson, R Šumbera, R Buffenstein, X Zhou, A Krogh, T Park, G Zhang, J Wang, V Gladyshev. Adaptations to a subterranean environment and longevity revealed by the analysis of mole rat genomes. Cell Reports, 8(5):1354-1364 (2014)
N Hudson, M Baker, N Hart, J Wynne, Q Gu, Z Huang, G Zhang, A Ingham, L Wang, A Reverter. Sensory rewiring in an echolocator: genome-wide modification of retinogenic and auditory genes in the bat Myotis davidii. G3 (Bethesda, Md.), 4(10):1825-1835 (2014)
N Terrapon, C Li, H Robertson, L Ji, X Meng, W Booth, Z Chen, C Childers, K Glastad, K Gokhale, J Gowin, W Gronenberg, R Hermansen, H Hu, B Hunt, A Huylmans, S Khalil, R Mitchell, M Munoz-Torres, J Mustard, H Pan, J Reese, M Scharf, F Sun, H Vogel, J Xiao, W Yang, Z Yang, Z Yang, J Zhou, J Zhu, C Brent, C Elsik, M Goodisman, D Liberles, R Roe, E Vargo, A Vilcinskas, J Wang, E Bornberg-Bauer, J Korb, G Zhang, J Liebig. Molecular traces of alternative social organization in a termite genome. Nature Communications, 5:3636 (2014)
S Liu, E Lorenzen, M Fumagalli, B Li, K Harris, Z Xiong, L Zhou, T Korneliussen, M Somel, C Babbitt, G Wray, J Li, W He, Z Wang, W Fu, X Xiang, C Morgan, A Doherty, M O'Connell, J McInerney, E Born, L Dalén, R Dietz, L Orlando, C Sonne, G Zhang, R Nielsen, E Willerslev, J Wang. Population genomics reveal recent speciation and rapid evolutionary adaptation in polar bears. Cell, 157(4):785-794 (2014)
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